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| Yamada A, Endo N, MurataH, Ohta A, Fukuda M. 2013. Tricholoma matsutake Y1 strain associated with Pinus densiflora shows a gradient of in vitro ectomycorrhizal specificity with Pinaceae and oak hosts. Mycoscience, doi: 10.1016/j.myc.2013.05.004 |
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Murata H, Ota Y, Yamada A, Ohta A, Yamanaka T, Neda H. 2013. Phylogenetic position of the ectomycorrhizal basidiomycete Tricholoma dulciolens in relation to species of Tricholoma that produce “matsutake” mushrooms. Mycoscience, DOI 10.1007/s00572-013-0487-x
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| Murata H, Ota Y, Yamaguchi M, Yamada A, Katahata S, Otsuka Y, Babasaki K, Neda H. 2013. Mobile DNA distributions refine the phylogeny of "matsutake" mushrooms, Tricholoma sect. Caligata. Mycorrhiza, DOI 10.1007/s00572-013-0487-x |
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| Endo, N., Gisusi, S., Fukuda, M., Yamada, A. 2013. In vitro mycorrhization and acclimatization of Amanita caesareoides and its relatives on Pinus densiflora. Mycorrhiza, DOI 10.1007/s00572-012-0471 |
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| Murata H, Yamada A, Maruyama T, Endo N, Yamamoto K,Ohira T, Shimokawa T. 2013. Root endophyte interaction between ectomycorrhizal basidiomycete Tricholoma matsutake and arbuscular mycorrhizal tree Cedrela odorata, allowing in vitro synthesis of rhizospheric 'shiro'. Mycorrhiza 23: 235-242; DOI: 10. 1007/s00572-012-0466-7 |
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| 山田明義・松田陽介．外生菌根菌の放射能汚染に関わる諸問題．日本きのこ学会誌 20(3), 154-157 |
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| Ota Y, Yamanaka T, Murata H, Neda H, Ohta A, Kawai M, Yamada A, Konno M, Tanaka C. 2012. Phylogenetic relationship and species delimitation of matsutake and allied species based on multilocus phylogeny and haplotype analyses.
Mycologia 104(6), 1369-1380; doi: 10.3852/12-068 |
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| Phan, N. D.H., Yamada, A., Shimizu, K., Noda, K., Dang, L.A.T., Suzuki, A. 2012. A sheathing mycorrhiza between the tropical bolete Phlebopus spongiosus and Citrus maxima. Mycoscience 53 (5), 347-353 |
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| Yamanaka T, Maruyama T, Yamada A, Miyazaki Y, Kikuchi T. 2012. Ectomycorrhizal formation on regenerated somatic pine plants after inoculation with Tricholoma matsutake. Mushroom Science and Biotechnology 20: 93-97 |
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| 山田明義・増野和彦・福田正樹．2012. 日本産ホンシメジおよびその近縁種の分類学的問題点について．日本きのこ学会誌 20: 9-15 |
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| Matsuda Y, Okochi S, Katayama T, Yamada A, Ito S. 2011. Mycorrhizal fungi associated with Monotropastrum humile (Ericaceae) in central Japan. Mycorrhiza 21: 569-576 doi: 10.1007/s00572-011-0365-3 |
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| Okada K, Okada Y, Yasue K, Fukuda M, Yamada A. 2011. Six-year monitoring of pine ectomycorrhizal biomass under a temperate monsoon climate indicates significant annual fluctuations in relation to climatic factors. Ecol Res 26：411-149 DOI 10.1007/s11284-011-0800-0 |
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| Okada K, Satomura T, Kinoshita A, Horikoshi T, Yasue K, Fukuda M, Yamada A. 2011. Difference of pine ectomycorrhizal biomass in relation to forest conditions. Mycoscience 52: 59-64 |
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| Fangfuk W, Petchang R, To-anun W, Fukuda M, Yamada A. 2010. Identification of Japanese Astraeus, based on morphological and phylogenetic analyses. Mycoscience 51: 291-299 |
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Fangfuk W, Okada K, Petchang R, To-anun C, Fukuda M, Yamada A. 2010. In vitro mycorrhization of edible Astraeus mushrooms and their morphological characterization. Mycoscience 51: 234−241
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| Yamada A, Kobayashi H, Murata H, Kalmis E, Kalyoncu, Fukuda M . 2010. In vitro ectomycorrhizal specificity between the Asian red pine Pinus densiflora and Tricholoma matsutake and allied species from worldwide Pinaceae and Fagaceae forests. Mycorrhiza 20: 333−339 |
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| Masuno K, Ito E, Fukuda M, Yamada A, Hosokawa N, Nishizawa K. 2009. Mitochondrial DNA variability in natural population of Naematoloma sublateritium in Japan. Mushroom Science and Biotechnology 17: 65-69 |
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| 小林久泰・綿引健夫・山田明義. 2009. 北川式ガス検知管によるマツタケ菌根苗作出用容器内の二酸化炭素濃度測定．関東森林研究 60: 301-302 |
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| 安井明美・後藤哲久・湯川剛一郎 編著. 2009. 食品の化学物質危害防止ハンドブック（第3章第6節，植物毒，pp209-221，執筆担当），Science Forum，298p |
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| Yamada A, Kitamura D, Setoguchi M, Matsuda Y, Hashimoto Y, Matsushita N, Fukuda M. 2008. Monotropastrum humile var. humile is associated with diverse ectomycorrhizal Russulaceae fungi in Japanese forests. Ecological Research 23: 983-993 |
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| Murata H, Babasaki K, Saegusa T, Takemoto K, Yamada A, Ohta A. 2008. Traceability of Asian 'matsutake', specialty mushrooms produced by the ectomycorrhizal basidiomycete Tricholoma matsutake, based on retroelement-based DNA markers. Applied and Environmental Microbiology 74：2023-2031 |
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| Mahmud MA, Ohno S, Fukuda M, Yamada A, Hattori Y, Makabe H. 2008. Stimulation conditions for spore germination of Agaricus blazei. Mushroom Science and Biotechnology 16: 87-92 |
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| 小林久泰・寺崎正孝・山田明義. 2008. 野外に植え付けて1年経過した菌根苗根系におけるマツタケ菌糸の生存．関東森林研究59：325-326 |
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| 山田明義・小林久泰. 2008. マツタケ人工栽培の展望．森林科学53: 41-42 |
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| 国立科学博物館編. 2008. 菌類の不思議（第2部2.2章，植物とともに生きている菌類：菌根共生，pp172-180，執筆担当），東海大学出版 |
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| 小林久泰・綿引健夫・倉持眞寿美・小野瀬究明・山田明義. 2007. 大型培養容器によるマツタケのシロ様構造を有するマツ菌根苗の生産．日本きのこ学会誌15：151-155 |
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| Fukuda M, Mori Y, Yamada A. 2007. Genetic variability among Pholiota aurivella isolates from anaturual population. Mycoscience 48: 381-387 |
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| Mahmud MA, Kitaura H, Fukuda M, Yamada A. 2007. AFLP analysis for examining genetic difference in cultivated strains and their single-spore isolates and for confirming successful crosses in Agaricus blazei. Mycoscience 48: 297-304 |
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| Yamada A, Kobayashi H, Ogura T, Fukuda M. 2007. Sustainable fruit body formations of edible mycorrhizal Tricholoma species for three years in open pot culture with pine seedling hosts. Mycoscience 48: 104-108 |
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山田明義・山縣夏紀・河村史紀・岡田慶一・細矢剛・出川洋介・福田正樹. 2006. 宿主植物実生の植え付けによる森林土壌からの外生菌根菌の検出．日本菌学会会報47：25-32
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Hosoya T, Tanaka C, Yamada A, Baharuddin S. 2006. Survey of stream spora of Penang Island and the Malay Peninsula. Bull. Natn. Mus, Tokyo Ser. B 32: 123-127
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| Yamada A, Maeda K, Kobayashi H, Murata H. 2006. Ectomycorrhizal symbiosis in vitro between Tricholoma matsutake and Pinus densiflora seedlings that resembles naturally occurring ‘shiro’. Mycorrhiza 16：111-116 |
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Murata H, Ohta A, Yamada A, Narimatsu M, Futamura N. 2005. Genetic mosaics in the a massive persisting rhizosphere colony ‘shiro’ of the ectomycorrhizal basidiomycete Tricholoma matsutake. Mycorrhiza 15: 505-512
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| Murata H, Babasaki K and Yamada A. 2005. Highly polymorphic DNA markers to specify strains of the ectomycorrhizal basidiomycete Tricholoma matsutake based on σmarY1, the long terminal repeat of gypsy-type retroelement marY1. Mycorrhiza 15: 179-186 |
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| 山田明義. 2003. アカマツ林における外生菌根菌の生態と菌根形成に関する研究，及び菌根性きのこ類の人工増殖に関する総合的研究．日本菌学会報44：9-18 |
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| Matsuda Y, Yamada A. 2003. Mycorrhizal morphology of Monotropa humile collected from six different forests in central Japan. Mycologia 95: 993-997 |
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Kobayashi H, Yamada A. 2003. Two new records of entolomatoid fungi associated with rosaceous plants from Japan. Mycoscience 44: 331-333
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Yamada A, Kobayashi H, Murata H. 2003. Tricholoma matsutake IFO6933 and IFO30604, ‘matsutake’ isolates that have been maintained on slants and widely used in vitro for a quarter to half a century, can form ectomycorrhizae in Pinus densiflora. Mycoscience 44: 249-251
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| Lian C, Hogetsu T, Matsushita N, Guerin-Laguett A, Suzuki K, Yamada A. 2003. Development of microsatellite markers from an ectomycorrhizal fungus, Tricholoma matsutake, by an ISSR-suppression-PCR method. Mycorrhiza 13: 27-32 |
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| Kobayashi H, Yamada A. 2003. Chlamydospore formation of Entoloma clypeatum f. hybridum on mycorrhizas and rhizomorphs associated with Rosa multiflora. Mycoscience 44: 61-62 |
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| 堀越孝雄・二井一禎 編著. 2003. 土壌微生物生態学（第3章2節，菌根共生，pp44-61，執筆担当），朝倉書店 |
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| 山田明義. 2002. 日本産菌根性きのこ類の食資源としての利用性. 信州大学農学部紀要38: 1-17 |
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| Murata H, Miyazaki Y, Yamada A. 2002. Genetic evidence that two types of retroelements evolved through different pathway in ectomycorrhizal homobasidiomycetes Tricholoma spp. Biosci. Biotechnol. Biochem. 66: 1880-1886 |
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| Yamada A, Ogura T, Ohmasa M. 2002. Mushroom cultivation of some Japanese edible ectomycorrhizal fungi. Edible mycorrhizal mushrooms and their cultivation (Proceedings of the 2nd International conference on Edible Mycorrhizal Mushrooms), P1-7, Christchurch, New Zealand |
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| 宍戸和夫 編著. 2002. キノコとカビの基礎科学とバイオ技術（第4章３節，マツタケおよび近縁種における植物共生系キノコ発生，pp354-363，執筆担当），アイピーシー，564P |
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| Murata H, Miyazaki Y, Yamada A. 2001. marY2, a LINE-like non-long terminal repeat (Non-LTR) reteroelement from the ectomycorrhizal homobasidiomycete Tricholoma matsutake. Biosci. Biotechnol. Biochem. 65: 2301-2305 |
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| 山田明義．2001. 菌類の検出と分離：外生菌根菌 (III) 分離培養法ならびに釣菌法．日本菌学会報 42: 177-187 |
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| 山田明義．2001. 菌類の検出と分離：外生菌根菌 (II) 顕微鏡観察法．日本菌学会報 42: 105-111 |
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| Murata H, Yamada A. 2001. Amplification and cloning of putative reverse trancriptase genes from Tricholoma spp. by polymerase chain reaction Mycoscience 42: 395-398 |
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| Yamada A Katsuya K. 2001. The disparity between the number of ectomycorrhizal fungi and those producing fruit bodies in a Pinus densiflora stand. Mycological Research 105: 957-965 |
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| Yamada A, Ogura T, Ohmasa M. 2001. Cultivation of mushrooms of edible ectomycorrhizal fungi associated with Pinus densiflora by in vitro mycorrhizal synthesis II. Morphological description of ectomycorrhizas in open-pot soil. Mycorrhiza 11: 67-81 |
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| Yamada A, Ogura T, Ohmasa M. 2001. Cultivation of mushrooms of edible ectomycorrhizal fungi associated with Pinus densiflora by in vitro mycorrhizal synthesis I. Primordium and basidiocarp formations in open-pot culture. Mycorrhiza 11: 59-66 |
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| 山田明義．2001. 菌類の検出と分離：外生菌根菌 (I) 採集法ならびに採集試料の前処理法．日本菌学会報 42: 33-39 |
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| Yamada A, Ogura T, Degawa Y, Ohmasa M. 2001. Isolation of Tricholoma matsutake and T. bakamatsutake cultures from field-collected ectomycorrhizas. Mycoscience 42: 43-50 |
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| 松田陽介・山田明義．2001. ギンリョウソウに形成された菌根の形態類別．林学会中部支部大会論文集49: 27-28 |
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| Kohzu A, Tateishi T, Yamada A, Koba K, Wada E. 2000. Nitrogen isotope fractionation during nitrogen transport from ectomycorrhizal fungi, Suillus granulatus, to the host plant, Pinus densiflora. Soil Sci. Plant Nutr. 46: 733-739 |
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| Murata H, Yamada A. 2000. marY1, a member of the gypsy group of long terminal repeat retroelements from the ectomycorrhizal basidiomycete Tricholoma matsutake. Applied and Environmental Microbiology 66: 3642-3645 |
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| 前田顕・津田裕司・山田明義・金川聡・寺崎正孝・村松普. 1999. マツタケ子実体発生増加を目的としたアカマツ林の環境整備. 日本林学関東支部第 50 回大会論文集 163-164 |
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| Yamada A, Kanekawa S, Ohmasa M. 1999. Ectomycorrhiza formation of Tricholoma matsutake on Pinus densiflora. Mycoscience 40: 193-198 |
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| Murata H, Yamada A, Babasaki K. 1999. Identifiction of repetitive sequences with motifs of retrotransposons in the ectomycorrhizal basidiomycete Tricholoma matsutake . Mycologia 91: 766-775 |
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| Yamada A, Maeda K, Ohmasa M. 1999. Ectomycorrhizal formation of Tricholoma matsutake isolates on seedlings of Pinus densiflora in vitro. Mycoscience 40: 455-463 |
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| Murata H, Yamada A. 1999. Identification of ectomycorrhizae formed between Tricholoma matsutake and Pinus densiflora by polymerase chain reaction (PCR) targeting retroelement codiong regions. Mycoscience 40: 531-534 |
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| 山田明義・寺崎正孝. 1998. 茨城県産マツタケ培養菌株の性状. 日本林学会第 109 回大会論文集 521-522 |
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| Yamada A. 1998. Russula delica + Betula platiphylla var. japonica. Concise descriptions of North American Ectomycorrhizae. Mycologue Publications. Description code-16 |
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| Yamada A. 1998. Russula nigricans + Betula platiphylla var. japonica. Concise descriptions of North American Ectomycorrhizae. Mycologue Publications. Description code-17 |
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| Yamada A, Katsuya, K. 1996. Morphological classification of ectomycorrhizas of Pinus densiflora. Mycoscience 37: 145-155 |
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| 山田明義. 1996. アカマツ林内における外生菌根菌の群集生態学的研究. 博士論文，130p (+28図版），筑波大学 |
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| Yamada A, Katsuya K. 1995. Mycorrhizal association of isolates from sporocarps and ectomycorrhizas with Pinus densiflora seedlings. Mycoscience 36: 315-323 |